bidsaid.audit.BIDSAuditor
- class bidsaid.audit.BIDSAuditor(bids_dir, derivatives_dir=None)[source]
Check availability of different files for each subject in the BIDS directory.
Parameters
- bids_dir
strorPath The root of the BIDS compliant directory.
Attributes
- bids_dir
strorPath The root of the BIDS compliant directory.
- derivatives_dir
bool,str,Path, or obj:None, default=None The root to the fMRIPrep directory.
Methods
check_events_availability([run_id])Checks the availability of events TSV files for each subject and their sessions.
check_first_level_availability(analysis_dir)Checks availability of first level beta or contrast maps for each subject and their sessions.
Checks the availability of the preprocessed NIfTI files for each subject and their sessions.
check_raw_nifti_availability([run_id])Checks the availability of the unpreprocessed NIfTI files for each subject and their sessions.
check_raw_sidecar_availability([run_id])Checks the availability of JSON sidecar files for each subject and their sessions.
Clear all cached data.
- bids_dir